研究業績
論文: ~2011年 論文: 2010~2004年 総 説
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1,2-Bis-perfluoroalkylations of alkenes and alkynes with perfluorocarboxylic anhydrides via the formation of perfluoroalkylcopper intermediates
Takuma Tagami, Yuma Aoki, Shintaro Kawamura, Mikiko Sodeoka
Org. Biomol. Chem. 2021, 19, 9148-9153.
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- Deuteration of terminal alkynes realizes simultaneous live cell Raman imaging of similar alkyne-tagged biomolecules
Syusuke Egoshi, Kosuke Dodo, Kenji Ohgane, Mikiko Sodeoka
Org. Biomol. Chem. 2021, 19, 8232-8236.
Editor’s Collection: Meet the authors – Dr Kosuke Dodo, Dr Mikiko Sodeoka et al.
- Dynamics in Catalytic Asymmetric Diastereoconvergent (3 + 2) Cycloadditions with Isomerizable Nitrones and α-Keto Ester Enolates
Tetsuya Ezawa, Yoshihiro Sohtome, Daisuke Hashizume, Masaya Adachi, Mai Akakabe, Hiroyuki Koshino, Mikiko Sodeoka
J. Am. Chem. Soc. 2021, 143, 9094-9104.
理研プレスリリース (2021年6月10日)
- The methyltransferase METTL9 mediates pervasive 1-methylhistidine modification in mammalian proteomes
Erna Davydova, Tadahiro Shimazu, Maren Kirstin Schuhmacher, Magnus E. Jakobsson, Hanneke L. D. M. Willemen, Tongri Liu, Anders Moen, Angela Y. Y. Ho, Jędrzej Małecki, Lisa Schroer, Rita Pinto, Takehiro Suzuki, Ida A. Grønsberg, Yoshihiro Sohtome, Mai Akakabe, Sara Weirich, Masaki Kikuchi, Jesper V. Olsen, Naoshi Dohmae, Takashi Umehara, Mikiko Sodeoka, Valentina Siino, Michael A. McDonough, Niels Eijkelkamp, Christopher J. Schofield, Albert Jeltsch, Yoichi Shinkai, Pål Ø. Falnes
Nat. Commun. 2021, 12, 891.
理研プレスリリース (2021年2月9日)
- Cu-catalyzed Allylic Perfluoroalkylation of Alkenes Using Perfluoro Acid Anhydrides: Preparation of N-(5,5,5-Trifluoro-2-penten-1-yl)phthalimide
Yuma Aoki, Shintaro Kawamura, Mikiko Sodeoka
Org. Synth. 2021, 98, 84-96.
- Synthesis of deuterated γ-linolenic acid and application for biological studies: metabolic tuning and Raman imaging
Kosuke Dodo, Ayato Sato, Yuki Tamura, Syusuke Egoshi, Koichi Fujiwara, Kana Oonuma, Shuhei Nakao, Naoki Terayama, Mikiko Sodeoka
Chem. Commun. 2021, 57, 2180-2183.
- Image-based screen capturing misfolding status of Niemann-Pick type C1 identifies potential candidates for chaperone drugs
Ryuta Shioi, Fumika Karaki, Hiromasa Yoshioka, Tomomi Noguchi-Yachide, Minoru Ishikawa, Kosuke Dodo, Yuichi Hashimoto, Mikiko Sodeoka, Kenji Ohgane
PLOS ONE 2020, 15, e0243746.
- Synthesis of DFGH-Ring Derivatives of Physalins via One-Pot Construction of GH-Ring and Evaluation of Their NF-κB-Inhibitory Activity
Makoto Yoritate, Yuki Morita, Manuel Gemander, Masaki Morita, Tomohiro Yamashita, Mikiko Sodeoka, Go Hirai
Org. Lett. 2020, 22, 8877-8881.
- Ganglioside GM3 Analogues Containing Monofluoromethylene-Linked Sialoside: Synthesis, Stereochemical Effects, Conformational Behavior, and Biological Activities
Go Hirai, Marie Kato, Marie Kato, Hiroyuki Koshino, Eri Nishizawa, Kana Oonuma, Eisuke Ota, Toru Watanabe, Daisuke Hashizume, Yuki Tamura, Mitsuaki Okada, Taeko Miyagi, Mikiko Sodeoka
JACS Au 2021, 1, 137-146.
理研プレスリリース (2020年12月24日)
- Dual targeting of DDX3 and eIF4A by the translation inhibitor rocaglamide A
Mingming Chen, Miwako Asanuma, Mari Takahashi, Yuichi Shichino, Mari Mito, Koichi Fujiwara,Hironori Saito, Stephen N. Floor, Nicholas T. Ingolia, Mikiko, Sodeoka, Kosuke Dodo, Takuhiro Ito, Shintaro Iwasaki
Cell Chem. Biol. 2020, 28, 475-486.e8.
理研プレスリリース (2020年12月10日)
- Quantitative Drug Dynamics Visualized by Alkyne-Tagged Plasmonic-Enhanced Raman Microscopy
Kota Koike, Kazuki Bando, Jun Ando, Hiroyuki Yamakoshi, Naoki Terayama, Kosuke Dodo, Nicholas Isaac Smith, Mikiko Sodeoka, Katsumasa Fujita
ACS nano. 2020, 14, 15032-15041.
理研プレスリリース (2020年11月19日)
- Regiodivergent Oxidative Cross-Coupling of Catechols with Persistent tert-Carbon Radicals
Masumi Sugawara, Rikako Ohnishi, Tetsuya Ezawa, Mai Akakabe, Miki Sawamura, Daiki Hojo, Daisuke Hashizume, Yoshihiro Sohtome, Mikiko Sodeoka
ACS Catal. 2020, 10, 12770-12782.
Cover art
理研プレスリリース (2020年10月22日)
- Formal Aerobic Oxidative Cross-Coupling of Benzofuranones with Azo Compounds Using Pd-μ-hydroxo Complex
Rikako Ohnishi, Masumi Sugawara, Tetsuya Ezawa, Yoshihiro Sohtome, Mikiko Sodeoka
Chem. Pharm. Bull. 2020, 68, 895-898.
- Development of a Water-Soluble Indolylmaleimide Derivative IM-93 Showing Dual Inhibition of Ferroptosis and NETosis
Kosuke Dodo, Erika Kuboki, Tadashi Shimizu, Ryu Imamura, Megumi Magarisawa, Masahiro Takahashi, Takuto Tokuhiro, Satoshi Yotsumoto, Kenichi Asano, Shuhei Nakao, Naoki Terayama, Takashi Suda, Masato Tanaka, Mikiko Sodeoka
ACS Med. Chem. Lett. 2019, 109, 1272-1278.
- Cross-coupling reaction of dimer-derived persistent tertiary-carbon-centered radicals with azo compounds
Rikako Ohnishi, Masumi Sugawara, Mai Akakabe, Tetsuya Ezawa, Hiroyuki Koshino, Yoshihiro Sohtome, Mikiko Sodeoka
Asian J. Org. Chem. 2019, 8, 1017-1023.
- The translation inhibitor rocaglamide targets a bimolecular cavity between eIF4A and polypurine RNA
Shintaro Iwasaki, Wakana Iwasaki, Mari Takahashi, Ayako Sakamoto, Chiduru Watanabe, Yuichi Shichino, Stephen N. Floor, Koichi Fujiwara, Mari Mito, Kosuke Dodo, Mikiko Sodeoka, Hiroaki Imataka, Teruki Honma, Kaori Fukuzawa, Takuhiro Ito, Nicholas T. Ingolia
Mol. Cell. 2019, 73, 738-748.
理研プレスリリース (2018年12月28日)
- Detection of esterase activity by chromogenic and fluorogenic probe based on an O-nitrobenzoxadiazole (O-NBD) unit
Kana Okada, Takao Yamaguchi, Kosuke Dodo, Mikiko Sodeoka, Satoshi Obika
Bioorg. Med. Chem. 2019, 27, 1444-1448.
- Synthesis of all stereoisomers of RK460 and evaluation of their activity and selectivity as abscisic acid receptor antagonists
Yu Mikame, Kazuko Yoshida, Daisuke Hashizume, Go Hirai, Kazuo Nagasawa, Hiroyuki Osada, Mikiko Sodeoka
Chem. Eur. J. 2019, 25, 3496-3500.
- Control of site selectivity in trifluoromethylation of alkenes bearing a pendant indolyl group: Synthesis of CF3-containing tetrahedrocarbazoles
Ryo Murakami, Daisuke Sekine, Yuma Aoki, Shintaro Kawamura, Mikiko Sodeoka
Tetrahedron 2019, 75, 1327-1335.
- Tri-methylation of ATF7IP by G9a/GLP recruits the chromodomain protein MPP8
Takeshi Tsusaka, Masaki Kikuchi, Tadahiro Shimazu, Takehiro Suzuki, Yoshihiro Sohtome, Mai Akakabe, Mikiko Sodeoka, Naoshi Dohmae, Takashi Umehara, Yoichi Shinkai
Epigenetics & Chromatin 2018, 11:56.
- Reactivity and properties of bis(chlorodifluoroacetyl)peroxide generated in situ from chlorodifluoroacetic anhydride for chlorodifluoromethylation reactions
Shintaro Kawamura, Cassandra J. Henderson, Yuma Aoki, Daisuke Sekine, Shū Kobayashi, Mikiko Sodeoka
Chem. Commun. 2018, 54, 11276-11279.
- Metal-free alkene oxy- and amino-perfluoroalkylations via carbocation formation by using perfluoro acid anhydrides:
unique reactivity between styrenes and perfluoro diacyl peroxides
Elena Valverde, Shintaro Kawamura, Daisuke Sekine, Mikiko Sodeoka
Chem. Sci. 2018, 9, 7115-7121.
理研プレスリリース (2018年8月8日)
- Unveiling epidithiodiketopiperazine as a non-histone arginine methyltransferase inhibitor by chemical protein methylome analyses
Yoshihiro Sohtome, Tadahiro Shimazu, Joaquin Barjau, Shinya Fujishiro, Mai Akakabe, Naoki Terayama, Kosuke Dodo, Akihiro Ito, Minoru Yoshida, Yoichi Shinkai, Mikiko Sodeoka
Chem. Commun. 2018, 54, 9202-9205.
理研プレスリリース (2018年8月6日)
- The alkyne-tag Raman imaging of coronatine, a plant pathogen virulence factor, in Commelina communis and its possible mode of action
Minoru Ueda, Kengo Hayashi, Syusuke Egoshi, Yasuhiro Ishimaru, Yousuke Takaoka, Hiroyuki Yamakoshi, Kosuke Dodo, Mikiko Sodeoka
Org. Biomol. Chem. 2018, 16, 3348-3352.
- Thienyl-Substituted α-Ketoamide: A Less Hydrophobic Reactive Group for Photo-Affinity Labeling
Eisuke Ota, Kazuteru Usui, Kana Oonuma, Hiroyuki Koshino, Shigeru Nishiyama, Go Hirai, Mikiko Sodeoka
ACS Chem. Biol. 2018, 13, 876-880.
理研プレスリリース (2018年2月22日)
- Indolylmaleimide Derivative IM-17 Shows Cardioprotective Effects in Ischemia-Reperfusion Injury
Kosuke Dodo, Tadashi Shimizu, Jun Sasamori, Kazuyuki Aihara, Naoki Terayama, Shuhei Nakao, Katsuya Iuchi, Masahiro Takahashi, Mikiko Sodeoka
ACS Med. Chem. Lett. 2018, 9, 182-187.
理研プレスリリース (2018年2月21日)
- Synthesis of CF3-containing oxazolines via trifluoromethylation of allylamides with Togni reagent in the presence of alkali metal iodides
Shintaro Kawamura, Daisuke Sekine, Mikiko Sodeoka
J. Fluorine Chem. 2017, 203, 115-121.
- Hyperoxidation of ether-linked phospholipids accelerates neutrophil extracellular trap formation
Satoshi Yotsumoto, Yuito Muroi, Tatsuya Chiba, Rio Ohmura, Maki Yoneyama, Megumi Magarisawa, Kosuke Dodo, Naoki Terayama, Mikiko Sodeoka, Ryohei Aoyagi, Makoto Arita, Satoko Arakawa, Shigeomi Shimizu, Masato Tanaka
Scientific Reports 2017, 7, Article number: 16026.
- N-Heterocycle-Forming Amino/Carboperfluoroalkylations of Aminoalkenes by Using Perfluoro Acid Anhydrides: Mechanistic Studies and Applications Directed Toward Perfluoroalkylated Compound Libraries
Shintaro Kawamura, Kento Dosei, Elena Valverde, Kiminori Ushida, Mikiko Sodeoka
J. Org. Chem. 2017, 82, 12539-12553.
理研プレスリリース (2017年11月9日)
- Specific fluorescence labeling of target proteins by using a ligand-4-azidophthalimide conjugate
Kosuke Chiba, Miwako Asanuma, Minoru Ishikawa, Yuichi Hashimoto, Kosuke Dodo, Mikiko Sodeoka, Takao Yamaguchi
Chem. Commun. 2017, 53, 8751-8754.
- Crystal structural characterization reveals novel oligomeric interactions of human voltage-dependent anion channel 1
Toshiaki Hosaka, Masateru Okazaki, Tomomi Kimura-Someya, Yoshiko Ishizuka-Katsura, Kaori Ito, Shigeyuki Yokoyama, Kosuke Dodo, Mikiko Sodeoka, Mikako Shirouzu
Protein Sci. 2017, 26, 1749-1758.
- Catalytic Enantioselective [3 + 2] Cycloaddition of α-Keto Ester Enolates and Nitrile Oxides
Samuel L. Bartlett, Yoshihiro Sohtome, Daisuke Hashizume, Peter S. White, Miki Sawamura, Jeffrey S. Johnson, Mikiko Sodeoka
J. Am. Chem. Soc. 2017, 139, 8661-8666.
- Noncanonical Function of a Small-Molecular Virulence Factor Coronatine against Plant Immunity: An In Vivo Raman Imaging Approach
Minoru Ueda, Syusuke Egoshi, Kosuke Dodo, Yasuhiro Ishimaru, Hiroyuki Yamakoshi, Takeshi Nakano, Yousuke Takaoka, Shinya Tsukiji, Mikiko Sodeoka
ACS Cent. Sci. 2017, 3, 462–472.
東北大学プレスリリース (2017年5月17日)
- Naked d-orbital in a centrochiral Ni(II) complex as a catalyst for asymmetric [3+2] cycloaddition
Yoshihiro Sohtome, Genta Nakamura, Atsuya Muranaka, Daisuke Hashizume, Sylvain Lectard, Teruhisa Tsuchimoto, Masanobu Uchiyama, Mikiko Sodeoka
Nat. Commun. 2017, 8, 14875.
理研プレスリリース (2017年4月6日)
- Reversibility of 3-Phenyl-2-oxindole Dimer Formation: Application to Construct Compounds with Two Distinct Vicinal All-Carbon Quaternary Centers
Yoshihiro Sohtome, Masumi Sugawara, Daisuke Hashizume, Daiki Hojo, Miki Sawamura, Atsuya Muranaka, Masanobu Uchiyama, Mikiko Sodeoka
Heterocycles 2017, 95, 1030-1040.
- Synthesis of the Right-Side Structure of Type B Physalins
Masaki Morita, Shuntaro Kojima, Megumi Ohkubo, Hiroyuki Koshino, Daisuke Hashizume, Go Hirai, Keiji Maruoka, Mikiko Sodeoka
Isr. J. Chem. 2017, 57, 309-318.
- Development of Dual-specificity Protein Phosphatases Inhibitors based on Focused Library Approach: Modification of a Core Structure and Unique Inhibition Mechanism
Go Hirai, Miwako Asanuma, Ayako Tsuchiya, Mikiko Sodeoka
J. Synth. Org. Chem. Jpn. 2016, 74, 532-540.
- A new carbamidemethyl-linked lanthanoid chelating tag for PCS NMR spectroscopy of proteins in living HeLa cells
Yuya Hikone, Go Hirai, Masaki Mishima, Kohsuke Inomata, Teppei Ikeya, Souichiro Arai, Masahiro Shirakawa, Mikiko Sodeoka, Yutaka Ito
J. Biomol. NMR 2016, 66, 99-110.
- Comparative Characterization of the Leaf Tissue of Physalis alkekengi and Physalis peruviana Using RNA-seq and Metabolite Profiling
Atsushi Fukushima, Michimi Nakamura, Hideyuki Suzuki, Mami Yamazaki, Eva Knoch, Tetsuya Mori, Naoyuki Umemoto, Masaki Morita, Go Hirai, Mikiko Sodeoka, Kazuki Saito
Front. Plant Sci. 2016, 7, 1883.
- Solvent-dependent copper-catalyzed synthesis of pyrazoles under aerobic conditions
Florian Pünner, Yoshihiro Sohtome, Mikiko Sodeoka
Chem. Commun. 2016, 52, 14093-14096.
Back cover
Chem. Commun. 2016, 52, 14174.




- Identification of Nitrogen Signaling Factors that regulate adaptive nitrogen metabolism in fission yeast
Xiaoying Sun, Go Hirai, Masashi Ueki, Hiroshi Hirota, Qianqian Wang, Yayoi Hongo, Takemichi Nakamura, Yuki Hitora, Hidekazu Takahashi, Mikiko Sodeoka, Hiroyuki Osada, Makiko Hamamoto, Minoru Yoshida, Yoko Yashiroda
Scientific Report 2016, 6, 20856.
- Dual function of coronatine as a bacterial virulence factor against plants: possible COI1–JAZindependent role
Syusuke Egoshi, Yousuke Takaoka, Hiroaki Saito, Yuuki Nukadzuka, Kengo Hayashi, Yasuhiro Ishimaru, Hiroyuki Yamakoshi, Kosuke Dodo, Mikiko Sodeoka, Minoru Ueda
RSC Adv. 2016, 6, 19404–19412.

- A Platinum-Catalyzed Friedel-Crafts-Type C-H Coupling-Allylic Amination Cascade to Synthesize 3,4-Fused Tricyclic Indoles
Yuta Suzuki, Yuito Tanaka, Shun-ichi Nakano, Kosuke Dodo, Natsumi Yada, Ken-ichi Shinohara, Kazuko Kita, Atsushi Kaneda, Mikiko Sodeoka, Yasumasa Hamada, Tetsuhiro Nemoto
Chem. Eur. J. 2016, 22, 4418-4421.

- Dual-Polarization Raman Spectral Imaging to Extract Overlapping Molecular Fingerprints of Living Cells
Liang-da Chiu, Almar F. Palonpon, Nicholas I. Smith, Satoshi Kawata, Mikiko Sodeoka, Katsumasa Fujita
J. Biophotonics 2015, 8, 546-554.




- Novel Raman-tagged sphingomyelin that closely mimics original raft-forming behavior
Jin Cui, Shigeru Matsuoka, Masanao Kinoshita, Nobuaki Matsumori, Fuminori Sato, Michio Murata, Jun Ando, Hiroyuki Yamakoshi, Kosuke Dodo, Mikiko Sodeoka
Bioorg. Med. Chem. 2015, 23, 2989-2994.






- Saccharothriolides A-C, Novel Phenyl-substituted 10-Membered Macrolides from a Rare Actinomycete Saccharothrix sp.
Shan Lu, Shinichi Nishimura, Go Hirai, Masashi Ito, Teppei Kawahara, Miho Izumikawa, Mikiko Sodeoka, Kazuo Shin-ya, Toshio Tsuchida, Hideaki Kakeya
Chem. Commun. 2015, 51, 8074-8077.





JSTプレスリリース (2013年12月16日)


- Molecular imaging of live cells by Raman microscopy
Almar F. Palonpon, Mikiko Sodeoka, Katsumasa Fujita
Curr. Opin. Chem. Biol. 2013, 17, 708-715.
- Iron-catalyzed trifluoromethylation with concomitant C-C bond formaiton via 1,2-migration of an aryl group
Hiromichi Egami, Ryo Shimizu, Yoshihiko Usui, Mikiko Sodeoka
Chem. Commun. 2013, 49, 7346-7348.


- Development of bis-unsaturated ester aldehydes as amino-glue probes: sequential double azaelectrocyclization as a promising strategy for bioconjugation
Katsunori Tanaka, Yuka Nakamoto, Eric R. O. Siwu, Ambara R. Pradipta, Koji Morimoto, Takeshi Fujiwara, Suguru Yoshida, Takamitsu Hosoya, Yuki Tamura, Go Hirai, Mikiko Sodeoka, Koichi Fukase
Org. Biomol. Chem. 2013, 11, 7326-7333.


- Contribution of Cage-Shaped Structure of Physalins to Their Mode of Action in Inhibition of NF-kB Action
Masaaki Ozawa, Masaki Morita, Go Hirai, Satoru Tamura, Masao Kawai, Ayako Tsuchiya, Kana Oonuma, Keiji Maruoka, Mikiko Sodeoka
ACS Med. Chem. Lett. 2013, 4, 730-735.



- CDC25A-inhibitory RE Derivatives Bind to Pocket Adjacent to the Catalytic Site
Ayako Tsuchiya, Miwako Asanuma, Go Hirai, Kana Oonuma, Muhammad Muddassar, Eri Nishizawa, Yusuke Koyama, Yuko Otani, Kam Y. J. Zhang, Mikiko Sodeoka
Mol. BioSyst. 2013, 9, 1026-1034.
